Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56059.1 | ABB56063.1 | Synpcc7942_0027 | Synpcc7942_0031 | 8-amino-7-oxononanoate synthase. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.999 |
ABB56059.1 | ABB58142.1 | Synpcc7942_0027 | Synpcc7942_2112 | 8-amino-7-oxononanoate synthase. | Conserved hypothetical protein. | 0.953 |
ABB56059.1 | bioB | Synpcc7942_0027 | Synpcc7942_0419 | 8-amino-7-oxononanoate synthase. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.933 |
ABB56059.1 | bioD | Synpcc7942_0027 | Synpcc7942_0030 | 8-amino-7-oxononanoate synthase. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.990 |
ABB56063.1 | ABB56059.1 | Synpcc7942_0031 | Synpcc7942_0027 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 8-amino-7-oxononanoate synthase. | 0.999 |
ABB56063.1 | ABB56377.1 | Synpcc7942_0031 | Synpcc7942_0345 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Biotin--acetyl-CoA-carboxylase ligase. | 0.419 |
ABB56063.1 | ABB57757.1 | Synpcc7942_0031 | Synpcc7942_1727 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | BioY protein. | 0.454 |
ABB56063.1 | ABB58142.1 | Synpcc7942_0031 | Synpcc7942_2112 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Conserved hypothetical protein. | 0.750 |
ABB56063.1 | bioB | Synpcc7942_0031 | Synpcc7942_0419 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.996 |
ABB56063.1 | bioD | Synpcc7942_0031 | Synpcc7942_0030 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.999 |
ABB56308.1 | bioB | Synpcc7942_0276 | Synpcc7942_0419 | Glycolate oxidase subunit GlcD. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.572 |
ABB56377.1 | ABB56063.1 | Synpcc7942_0345 | Synpcc7942_0031 | Biotin--acetyl-CoA-carboxylase ligase. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.419 |
ABB56377.1 | ABB57757.1 | Synpcc7942_0345 | Synpcc7942_1727 | Biotin--acetyl-CoA-carboxylase ligase. | BioY protein. | 0.419 |
ABB56377.1 | bioB | Synpcc7942_0345 | Synpcc7942_0419 | Biotin--acetyl-CoA-carboxylase ligase. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.940 |
ABB56452.1 | ABB56453.1 | Synpcc7942_0420 | Synpcc7942_0421 | Conserved hypothetical protein. | Hypothetical protein. | 0.675 |
ABB56452.1 | bioB | Synpcc7942_0420 | Synpcc7942_0419 | Conserved hypothetical protein. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.625 |
ABB56453.1 | ABB56452.1 | Synpcc7942_0421 | Synpcc7942_0420 | Hypothetical protein. | Conserved hypothetical protein. | 0.675 |
ABB56453.1 | bioB | Synpcc7942_0421 | Synpcc7942_0419 | Hypothetical protein. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.550 |
ABB57757.1 | ABB56063.1 | Synpcc7942_1727 | Synpcc7942_0031 | BioY protein. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.454 |
ABB57757.1 | ABB56377.1 | Synpcc7942_1727 | Synpcc7942_0345 | BioY protein. | Biotin--acetyl-CoA-carboxylase ligase. | 0.419 |
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