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sek0006 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"sek0006" - Nucleoid-associated protein Synpcc7942_0464 in Synechococcus elongatus PCC7942
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sek0006Nucleoid-associated protein Synpcc7942_0464; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (131 aa)    
Predicted Functional Partners:
ABB56495.1
annotation not available (163 aa)
              0.690
ABB56494.1
annotation not available (195 aa)
              0.599
ABB56497.1
annotation not available (241 aa)
              0.595
ABB58047.1
annotation not available (97 aa)
         
  0.565
sek0044
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (183 aa)
           
  0.558
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (211 aa)
   
   
  0.556
sek0009
annotation not available (145 aa)
              0.476
ABB56498.1
annotation not available (749 aa)
              0.437
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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