Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56711.1 | ABB58486.1 | Synpcc7942_0679 | Synpcc7942_2456 | RNA-binding region RNP-1. | Conserved hypothetical protein. | 0.628 |
ABB56711.1 | gpmI | Synpcc7942_0679 | Synpcc7942_0469 | RNA-binding region RNP-1. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.902 |
ABB56822.1 | ABB58486.1 | Synpcc7942_0790 | Synpcc7942_2456 | RNA-binding region RNP-1. | Conserved hypothetical protein. | 0.628 |
ABB56822.1 | gpmI | Synpcc7942_0790 | Synpcc7942_0469 | RNA-binding region RNP-1. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.902 |
ABB57026.1 | ABB57531.1 | Synpcc7942_0996 | Synpcc7942_1501 | Glycerate kinase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.905 |
ABB57026.1 | gpmI | Synpcc7942_0996 | Synpcc7942_0469 | Glycerate kinase. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.900 |
ABB57026.1 | pgk | Synpcc7942_0996 | Synpcc7942_1116 | Glycerate kinase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.900 |
ABB57026.1 | tpiA | Synpcc7942_0996 | Synpcc7942_1261 | Glycerate kinase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.526 |
ABB57531.1 | ABB57026.1 | Synpcc7942_1501 | Synpcc7942_0996 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycerate kinase. | 0.905 |
ABB57531.1 | gpmI | Synpcc7942_1501 | Synpcc7942_0469 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.908 |
ABB58029.1 | ABB58486.1 | Synpcc7942_1999 | Synpcc7942_2456 | RNA-binding region RNP-1. | Conserved hypothetical protein. | 0.628 |
ABB58029.1 | gpmI | Synpcc7942_1999 | Synpcc7942_0469 | RNA-binding region RNP-1. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.902 |
ABB58486.1 | ABB56711.1 | Synpcc7942_2456 | Synpcc7942_0679 | Conserved hypothetical protein. | RNA-binding region RNP-1. | 0.628 |
ABB58486.1 | ABB56822.1 | Synpcc7942_2456 | Synpcc7942_0790 | Conserved hypothetical protein. | RNA-binding region RNP-1. | 0.628 |
ABB58486.1 | ABB58029.1 | Synpcc7942_2456 | Synpcc7942_1999 | Conserved hypothetical protein. | RNA-binding region RNP-1. | 0.628 |
ABB58486.1 | gpmI | Synpcc7942_2456 | Synpcc7942_0469 | Conserved hypothetical protein. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.907 |
eno | gpmI | Synpcc7942_0639 | Synpcc7942_0469 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.995 |
eno | pgk | Synpcc7942_0639 | Synpcc7942_1116 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.995 |
eno | tal | Synpcc7942_0639 | Synpcc7942_2297 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily. | 0.938 |
eno | tpiA | Synpcc7942_0639 | Synpcc7942_1261 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.990 |
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