Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56124.1 | ABB56940.1 | Synpcc7942_0092 | Synpcc7942_0910 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.540 |
ABB56124.1 | ABB57467.1 | Synpcc7942_0092 | Synpcc7942_1437 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.511 |
ABB56124.1 | ABB57512.1 | Synpcc7942_0092 | Synpcc7942_1482 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.438 |
ABB56124.1 | ABB58292.1 | Synpcc7942_0092 | Synpcc7942_2262 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.760 |
ABB56124.1 | xseB | Synpcc7942_0092 | Synpcc7942_0472 | Conserved hypothetical protein. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.748 |
ABB56940.1 | ABB56124.1 | Synpcc7942_0910 | Synpcc7942_0092 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.540 |
ABB56940.1 | ABB57302.1 | Synpcc7942_0910 | Synpcc7942_1272 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.767 |
ABB56940.1 | ABB57783.1 | Synpcc7942_0910 | Synpcc7942_1753 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.679 |
ABB56940.1 | ABB58292.1 | Synpcc7942_0910 | Synpcc7942_2262 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.517 |
ABB56940.1 | xseB | Synpcc7942_0910 | Synpcc7942_0472 | Conserved hypothetical protein. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.671 |
ABB57302.1 | ABB56940.1 | Synpcc7942_1272 | Synpcc7942_0910 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.767 |
ABB57302.1 | ABB57467.1 | Synpcc7942_1272 | Synpcc7942_1437 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.618 |
ABB57302.1 | ABB57783.1 | Synpcc7942_1272 | Synpcc7942_1753 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.756 |
ABB57302.1 | xseB | Synpcc7942_1272 | Synpcc7942_0472 | Conserved hypothetical protein. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.644 |
ABB57467.1 | ABB56124.1 | Synpcc7942_1437 | Synpcc7942_0092 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.511 |
ABB57467.1 | ABB57302.1 | Synpcc7942_1437 | Synpcc7942_1272 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.618 |
ABB57467.1 | ABB57512.1 | Synpcc7942_1437 | Synpcc7942_1482 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.648 |
ABB57467.1 | ABB57634.1 | Synpcc7942_1437 | Synpcc7942_1604 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.660 |
ABB57467.1 | ABB57783.1 | Synpcc7942_1437 | Synpcc7942_1753 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.435 |
ABB57467.1 | psbM | Synpcc7942_1437 | Synpcc7942_0699 | Conserved hypothetical protein. | Photosystem II PsbM protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface. | 0.476 |
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