STRINGSTRING
ABB56552.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56552.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56552.1annotation not available (213 aa)    
Predicted Functional Partners:
ABB56553.1
annotation not available (195 aa)
              0.845
ABB56551.1
annotation not available (172 aa)
              0.679
ccmK
Carbon dioxide-concentrating mechanism protein CcmK; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (102 aa)
   
          0.609
ccmO
Uncharacterized protein CcmO; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (276 aa)
   
          0.595
ABB56317.1
annotation not available (113 aa)
   
          0.583
ccmL
annotation not available (99 aa)
 
 
 
  0.574
ccmM
Carbon dioxide concentrating mechanism protein CcmM; The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator (539 aa)
     
 
  0.551
ABB56550.1
annotation not available (387 aa)
              0.524
ABB58492.1
annotation not available (426 aa)
   
          0.472
ABB56316.1
annotation not available (102 aa)
   
          0.462
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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