STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56558.1ABC-type sugar transport systems permease components-like. (293 aa)    
Predicted Functional Partners:
ABB56503.1
ABC-type sugar transport system permease component-like.
 0.994
ABB58447.1
Transcriptional regulator, ABC transporter.
 0.988
ABB56978.1
Permease protein of sugar ABC transporter.
 
 0.971
ABB56977.1
ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.964
ABB56990.1
ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.964
ABB56980.1
Putative multiple sugar transport system substrate-binding protein.
 
 0.930
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.552
ABB56556.1
Conserved hypothetical protein.
       0.507
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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