Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56503.1 | ABB56558.1 | Synpcc7942_0471 | Synpcc7942_0526 | ABC-type sugar transport system permease component-like. | ABC-type sugar transport systems permease components-like. | 0.994 |
ABB56503.1 | ABB56977.1 | Synpcc7942_0471 | Synpcc7942_0947 | ABC-type sugar transport system permease component-like. | ATPase; Belongs to the ABC transporter superfamily. | 0.954 |
ABB56503.1 | ABB56980.1 | Synpcc7942_0471 | Synpcc7942_0950 | ABC-type sugar transport system permease component-like. | Putative multiple sugar transport system substrate-binding protein. | 0.919 |
ABB56503.1 | ABB56990.1 | Synpcc7942_0471 | Synpcc7942_0960 | ABC-type sugar transport system permease component-like. | ATPase; Belongs to the ABC transporter superfamily. | 0.953 |
ABB56503.1 | ABB58447.1 | Synpcc7942_0471 | Synpcc7942_2417 | ABC-type sugar transport system permease component-like. | Transcriptional regulator, ABC transporter. | 0.990 |
ABB56556.1 | ABB56558.1 | Synpcc7942_0524 | Synpcc7942_0526 | Conserved hypothetical protein. | ABC-type sugar transport systems permease components-like. | 0.507 |
ABB56556.1 | aroB | Synpcc7942_0524 | Synpcc7942_0525 | Conserved hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.705 |
ABB56558.1 | ABB56503.1 | Synpcc7942_0526 | Synpcc7942_0471 | ABC-type sugar transport systems permease components-like. | ABC-type sugar transport system permease component-like. | 0.994 |
ABB56558.1 | ABB56556.1 | Synpcc7942_0526 | Synpcc7942_0524 | ABC-type sugar transport systems permease components-like. | Conserved hypothetical protein. | 0.507 |
ABB56558.1 | ABB56977.1 | Synpcc7942_0526 | Synpcc7942_0947 | ABC-type sugar transport systems permease components-like. | ATPase; Belongs to the ABC transporter superfamily. | 0.964 |
ABB56558.1 | ABB56978.1 | Synpcc7942_0526 | Synpcc7942_0948 | ABC-type sugar transport systems permease components-like. | Permease protein of sugar ABC transporter. | 0.971 |
ABB56558.1 | ABB56980.1 | Synpcc7942_0526 | Synpcc7942_0950 | ABC-type sugar transport systems permease components-like. | Putative multiple sugar transport system substrate-binding protein. | 0.930 |
ABB56558.1 | ABB56990.1 | Synpcc7942_0526 | Synpcc7942_0960 | ABC-type sugar transport systems permease components-like. | ATPase; Belongs to the ABC transporter superfamily. | 0.964 |
ABB56558.1 | ABB58447.1 | Synpcc7942_0526 | Synpcc7942_2417 | ABC-type sugar transport systems permease components-like. | Transcriptional regulator, ABC transporter. | 0.988 |
ABB56558.1 | aroB | Synpcc7942_0526 | Synpcc7942_0525 | ABC-type sugar transport systems permease components-like. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.552 |
ABB56977.1 | ABB56503.1 | Synpcc7942_0947 | Synpcc7942_0471 | ATPase; Belongs to the ABC transporter superfamily. | ABC-type sugar transport system permease component-like. | 0.954 |
ABB56977.1 | ABB56558.1 | Synpcc7942_0947 | Synpcc7942_0526 | ATPase; Belongs to the ABC transporter superfamily. | ABC-type sugar transport systems permease components-like. | 0.964 |
ABB56977.1 | ABB56978.1 | Synpcc7942_0947 | Synpcc7942_0948 | ATPase; Belongs to the ABC transporter superfamily. | Permease protein of sugar ABC transporter. | 0.998 |
ABB56977.1 | ABB56980.1 | Synpcc7942_0947 | Synpcc7942_0950 | ATPase; Belongs to the ABC transporter superfamily. | Putative multiple sugar transport system substrate-binding protein. | 0.996 |
ABB56977.1 | ABB56990.1 | Synpcc7942_0947 | Synpcc7942_0960 | ATPase; Belongs to the ABC transporter superfamily. | ATPase; Belongs to the ABC transporter superfamily. | 0.909 |
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