STRINGSTRING
ABB56563.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56563.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56563.1annotation not available (287 aa)    
Predicted Functional Partners:
queG
Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family (317 aa)
              0.822
ABB56561.1
annotation not available (239 aa)
   
        0.768
ABB57036.1
annotation not available (359 aa)
 
          0.733
ABB57661.1
annotation not available (299 aa)
 
          0.671
ABB56560.1
annotation not available (329 aa)
              0.566
ABB56240.1
annotation not available (923 aa)
 
          0.547
SEM0037
annotation not available (638 aa)
   
 
  0.434
ABB56079.1
annotation not available (788 aa)
 
  0.424
ABB56135.1
annotation not available (125 aa)
   
 
  0.415
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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