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ABB56639.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56639.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56639.1annotation not available (108 aa)    
Predicted Functional Partners:
ABB56165.1
annotation not available (279 aa)
   
        0.782
ABB56455.1
annotation not available (72 aa)
   
          0.771
ABB57467.1
annotation not available (92 aa)
   
          0.760
ABB57283.1
annotation not available (93 aa)
   
          0.754
ABB58563.1
annotation not available (126 aa)
   
          0.737
aat
Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine (226 aa)
              0.716
ABB57960.1
annotation not available (247 aa)
   
          0.698
ABB56693.1
annotation not available (534 aa)
   
          0.692
ABB57359.1
annotation not available (208 aa)
   
        0.686
ABB57081.1
annotation not available (81 aa)
   
        0.685
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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