STRINGSTRING
ABB56662.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56662.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56662.1annotation not available (380 aa)    
Predicted Functional Partners:
ABB58452.1
annotation not available (288 aa)
   
          0.753
ABB56874.1
annotation not available (143 aa)
   
          0.741
ABB56580.1
annotation not available (386 aa)
   
          0.739
ABB57311.1
annotation not available (230 aa)
   
          0.720
ABB58118.1
annotation not available (104 aa)
   
          0.718
kaiA
Circadian clock protein KaiA; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of KaiC. In contrast, the presence of KaiB in the complex decreases the phosphorylation status of KaiC, suggesting that KaiB acts by antagonizing the interaction between KaiA and KaiC. A KaiA dimer is sufficient to enhance KaiC he [...] (284 aa)
   
          0.709
ABB56200.1
annotation not available (227 aa)
   
          0.694
ABB58468.1
annotation not available (477 aa)
   
          0.687
ABB56865.1
annotation not available (217 aa)
   
          0.686
ABB56060.1
annotation not available (222 aa)
   
          0.669
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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