STRINGSTRING
ABB56684.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56684.1" - annotation not available in Synechococcus elongatus PCC7942
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56684.1annotation not available (529 aa)    
Predicted Functional Partners:
zds
Probable zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (By similarity) (481 aa)
   
   
  0.926
ABB57276.1
annotation not available (504 aa)
 
 
  0.924
crtL
Lycopene beta cyclase; Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene (411 aa)
         
  0.906
ABB58469.1
annotation not available (331 aa)
     
 
  0.903
ABB56685.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (243 aa)
   
        0.848
ycf4
Photosystem I assembly protein Ycf4; Seems to be required for the assembly of the photosystem I complex (188 aa)
              0.845
ABB57288.1
annotation not available (137 aa)
 
        0.783
ABB56864.1
annotation not available (356 aa)
   
        0.782
ABB56186.1
annotation not available (205 aa)
   
        0.779
ABB56372.1
annotation not available (193 aa)
   
        0.778
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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