STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56736.1Chloramphenicol O-acetyltransferase. (211 aa)    
Predicted Functional Partners:
ABB58056.1
Probable glycosyltransferase.
  
  
 0.795
ABB56737.1
Conserved hypothetical protein.
       0.773
ABB56735.1
DNA processing protein DprA, putative.
  
  
 0.700
ABB57274.1
ATPase.
    
 0.650
ABB56733.1
Conserved hypothetical protein.
       0.592
ABB56734.1
Conserved hypothetical protein.
       0.592
ABB57589.1
Conserved hypothetical protein.
  
     0.591
ABB57638.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.517
ABB56530.1
Mannose-1-phosphate guanyltransferase.
  
  
 0.450
ABB56088.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.444
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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