STRINGSTRING
ABB56739.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56739.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56739.1annotation not available (489 aa)    
Predicted Functional Partners:
ABB56738.1
annotation not available (204 aa)
              0.882
ABB56740.1
annotation not available (583 aa)
              0.704
ABB58592.1
annotation not available (409 aa)
 
     
  0.657
speE
Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine (286 aa)
 
 
 
  0.549
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (98 aa)
   
 
      0.520
ABB56741.1
annotation not available (109 aa)
         
  0.496
ABB57909.1
annotation not available (312 aa)
       
 
  0.486
rpmH
annotation not available (45 aa)
       
      0.400
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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