STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56773.1Phage tail protein I. (279 aa)    
Predicted Functional Partners:
ABB56772.1
GPJ of phage P2-like.
  
 
 0.993
ABB56771.1
Conserved hypothetical protein.
  
 
 0.988
ABB56780.1
Phage major tail tube protein.
  
 
 0.977
ABB56779.1
Conserved hypothetical protein.
  
 
 0.969
ABB56770.1
Phage baseplate assembly protein V.
  
  
 0.966
ABB56785.1
Phage late control gene D protein GPD.
  
  
 0.963
ABB56783.1
Conserved hypothetical protein.
  
 
 0.953
ABB56784.1
Conserved hypothetical protein.
  
 
 0.934
ABB56763.1
Putative phage terminase large subunit.
  
  
 0.915
ABB56781.1
Hypothetical protein.
  
    0.874
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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