STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56805.1Conserved hypothetical protein YCF52. (201 aa)    
Predicted Functional Partners:
cpcT
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
     0.777
ABB57107.1
Conserved hypothetical protein.
  
     0.700
ABB57018.1
Conserved hypothetical protein YCF54.
  
     0.600
ABB56806.1
Esterase.
       0.585
ABB58299.1
Conserved hypothetical protein.
  
     0.573
ABB56590.1
Conserved hypothetical protein.
  
     0.571
mut3G
Conserved hypothetical protein YCF65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.565
ABB57703.1
Conserved hypothetical protein.
  
     0.547
ABB57862.1
Conserved hypothetical protein.
  
     0.547
ABB57515.1
Conserved hypothetical protein.
  
  
 0.538
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
Server load: low (28%) [HD]