STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56825.1Conserved hypothetical protein. (222 aa)    
Predicted Functional Partners:
ABB57557.1
Nitrogen assimilation regulatory protein.
 
 
 
 0.703
ABB58330.1
Conserved hypothetical protein.
  
     0.651
thf1
Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.647
ABB56224.1
Conserved hypothetical protein YCF60.
  
     0.639
ABB56430.1
Hypothetical protein.
  
     0.630
ABB56444.1
Hypothetical protein.
  
     0.616
ABB56894.1
Conserved hypothetical protein.
  
     0.592
ABB56116.1
Conserved hypothetical protein.
  
  
 0.580
ABB57960.1
Conserved hypothetical protein.
  
     0.577
ABB57646.1
Conserved hypothetical protein.
  
     0.570
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.