STRINGSTRING
ABB56881.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56881.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56881.1annotation not available (66 aa)    
Predicted Functional Partners:
ABB56880.1
annotation not available (203 aa)
              0.697
ABB56940.1
annotation not available (142 aa)
   
          0.574
ABB58091.1
annotation not available (89 aa)
   
          0.573
ABB58285.1
annotation not available (134 aa)
   
          0.570
ABB58311.1
annotation not available (318 aa)
   
          0.568
rpmF
annotation not available (58 aa)
   
          0.555
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (482 aa)
   
          0.533
ABB56996.1
annotation not available (195 aa)
   
          0.526
ABB57639.1
annotation not available (1137 aa)
   
          0.519
ABB58005.1
annotation not available (117 aa)
   
          0.492
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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