STRINGSTRING
ABB56884.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56884.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56884.1annotation not available (798 aa)    
Predicted Functional Partners:
ABB57634.1
annotation not available (450 aa)
   
          0.609
ABB57512.1
annotation not available (521 aa)
   
          0.608
ABB57170.1
annotation not available (585 aa)
   
        0.566
ABB58284.1
annotation not available (452 aa)
   
          0.549
dapL
LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate (411 aa)
              0.534
pcxA
Proton extrusion protein PcxA; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport (421 aa)
   
        0.533
ABB56689.1
annotation not available (113 aa)
   
          0.532
ABB56120.1
annotation not available (240 aa)
   
        0.527
ABB56104.1
annotation not available (217 aa)
   
          0.502
ABB57145.1
annotation not available (126 aa)
   
        0.496
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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