STRINGSTRING
ABB56905.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56905.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56905.1annotation not available (144 aa)    
Predicted Functional Partners:
ABB56904.1
annotation not available (1019 aa)
              0.845
ABB56116.1
annotation not available (233 aa)
   
          0.700
ABB58574.1
annotation not available (129 aa)
   
          0.673
ABB56649.1
annotation not available (125 aa)
   
          0.666
ABB56929.1
annotation not available (265 aa)
   
          0.649
ABB56461.1
annotation not available (179 aa)
   
          0.639
ABB56075.1
annotation not available (121 aa)
   
          0.627
ABB56515.1
annotation not available (147 aa)
   
          0.612
ABB58461.1
annotation not available (1269 aa)
   
          0.602
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (899 aa)
              0.602
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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