STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56930.1Conserved hypothetical protein. (67 aa)    
Predicted Functional Partners:
ABB56609.1
Conserved hypothetical protein.
  
     0.734
ABB57019.1
Conserved hypothetical protein.
  
     0.727
ABB57848.1
Conserved hypothetical protein.
  
     0.719
ABB58482.1
Tfp pilus assembly protein PilN-like.
  
     0.718
ABB57850.1
Conserved hypothetical protein; Belongs to the BI1 family.
  
     0.709
ABB56583.1
Conserved hypothetical protein.
  
   
 0.674
ABB57494.1
Probable porin; Belongs to the OprB family.
      
 0.649
ABB57637.1
Probable porin; major outer membrane protein; Belongs to the OprB family.
      
 0.649
ABB57685.1
Hypothetical protein.
      
 0.649
ABB57985.1
Conserved hypothetical protein.
  
     0.649
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.