STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56932.1Conserved hypothetical protein. (319 aa)    
Predicted Functional Partners:
ABB56933.1
Aconitase; Belongs to the aconitase/IPM isomerase family.
       0.592
ABB57367.1
Integrins alpha chain.
  
     0.585
ABB57934.1
Hemolysin secretion protein-like.
  
  
 0.583
ABB57162.1
Conserved hypothetical protein.
  
  
 0.572
ABB57158.1
Conserved hypothetical protein.
  
     0.550
ABB57935.1
Cyclic nucleotide-binding domain (cNMP-BD) protein.
 
  
 0.501
ABB57163.1
Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39.
 
  
 0.444
ABB58151.1
Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family.
  
    0.411
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.