STRINGSTRING
ABB56947.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56947.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56947.1annotation not available (88 aa)    
Predicted Functional Partners:
ABB58616.1
annotation not available (145 aa)
   
          0.755
ABB57952.1
Putative transmembrane transcriptional regulator; Anti-sigma factor (166 aa)
   
          0.609
ABB58506.1
annotation not available (111 aa)
   
          0.588
cmpC
Bicarbonate transport ATP-binding protein CmpC; Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Responsible for energy coupling to the transport system (Probable) (663 aa)
   
   
  0.586
ABB56606.1
annotation not available (276 aa)
   
          0.564
SEN0002
annotation not available (75 aa)
   
          0.542
ABB57982.1
annotation not available (113 aa)
   
          0.523
ABB58547.1
annotation not available (232 aa)
   
          0.522
ABB57402.1
annotation not available (1190 aa)
     
 
  0.512
ABB56996.1
annotation not available (195 aa)
   
          0.507
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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