STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nblSMulti-sensor signal transduction histidine kinase. (664 aa)    
Predicted Functional Partners:
nblR
Two component transcriptional regulator, winged helix family.
 
 0.993
ABB57483.1
Two component transcriptional regulator, winged helix family.
 
 0.970
ABB57890.1
Two component transcriptional regulator, LuxR family.
 
 0.958
ABB57847.1
Response regulator receiver domain protein (CheY-like).
 
 
 0.945
ABB57759.1
Potassium-transporting ATPase D chain.
  
 
 0.898
ABB56127.1
Two component transcriptional regulator, winged helix family.
 
 
 0.896
ABB58496.1
Two component transcriptional regulator, winged helix family.
  
 
 0.880
cheY
Response regulator receiver domain protein (CheY-like).
 
 
 0.877
ABB57845.1
Response regulator receiver domain protein (CheY-like).
 
 0.845
ABB57673.1
Diguanylate cyclase with GAF sensor.
    
 0.841
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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