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ABB56963.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56963.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56963.1annotation not available (171 aa)    
Predicted Functional Partners:
ABB56964.1
annotation not available (353 aa)
 
          0.673
ABB56334.1
annotation not available (479 aa)
   
          0.624
ABB58357.1
annotation not available (157 aa)
 
     
  0.600
cpcE
Phycocyanobilin lyase subunit alpha; Required for the chromophorylation of the cpcA gene product (273 aa)
   
          0.583
ABB56360.1
annotation not available (705 aa)
   
          0.581
ABB57079.1
annotation not available (273 aa)
   
          0.567
ABB56357.1
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (67 aa)
   
          0.567
psbZ
Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna (62 aa)
   
          0.561
cpcF
Phycobilisome maturation protein; Required for the chromophorylation of the cpcA gene product (207 aa)
   
          0.548
cpcA1
C-phycocyanin alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex (163 aa)
   
          0.540
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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