STRINGSTRING
ABB57011.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57011.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57011.1annotation not available (564 aa)    
Predicted Functional Partners:
ABB58228.1
annotation not available (376 aa)
 
     
  0.843
ABB57282.1
annotation not available (425 aa)
 
     
  0.837
ABB58039.1
annotation not available (922 aa)
 
     
  0.796
ABB57132.1
annotation not available (142 aa)
   
          0.704
ABB57012.1
annotation not available (204 aa)
 
          0.672
ABB57015.1
annotation not available (460 aa)
   
      0.607
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (266 aa)
              0.581
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily (228 aa)
              0.581
SEE0026
annotation not available (476 aa)
 
        0.547
ABB57556.1
annotation not available (263 aa)
   
          0.543
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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