STRINGSTRING
ABB57141.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57141.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57141.1annotation not available (527 aa)    
Predicted Functional Partners:
ABB57144.1
Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (287 aa)
   
      0.855
ABB57545.1
annotation not available (299 aa)
 
  0.854
ABB57145.1
annotation not available (126 aa)
   
        0.849
ABB57142.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (313 aa)
   
        0.847
ABB57143.1
annotation not available (363 aa)
   
        0.847
ABB57160.1
annotation not available (604 aa)
 
 
  0.846
ABB56079.1
annotation not available (788 aa)
   
 
  0.590
pgk
annotation not available (402 aa)
     
      0.523
ABB56139.1
annotation not available (472 aa)
   
 
 
  0.515
ABB58384.1
annotation not available (174 aa)
       
 
  0.464
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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