Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56175.1 | ABB57160.1 | Synpcc7942_0143 | Synpcc7942_1130 | Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Protein serine/threonine phosphatase. | 0.632 |
ABB56175.1 | gcvT | Synpcc7942_0143 | Synpcc7942_2308 | Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.674 |
ABB56632.1 | ABB57151.1 | Synpcc7942_0600 | Synpcc7942_1121 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.407 |
ABB56632.1 | ABB57160.1 | Synpcc7942_0600 | Synpcc7942_1130 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.848 |
ABB56632.1 | ABB57324.1 | Synpcc7942_0600 | Synpcc7942_1294 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.412 |
ABB56812.1 | ABB57160.1 | Synpcc7942_0780 | Synpcc7942_1130 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.838 |
ABB56992.1 | ABB57160.1 | Synpcc7942_0962 | Synpcc7942_1130 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Protein serine/threonine phosphatase. | 0.872 |
ABB56992.1 | fmt | Synpcc7942_0962 | Synpcc7942_2110 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.999 |
ABB57141.1 | ABB57160.1 | Synpcc7942_1111 | Synpcc7942_1130 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.846 |
ABB57151.1 | ABB56632.1 | Synpcc7942_1121 | Synpcc7942_0600 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.407 |
ABB57151.1 | ABB57160.1 | Synpcc7942_1121 | Synpcc7942_1130 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.845 |
ABB57159.1 | ABB57160.1 | Synpcc7942_1129 | Synpcc7942_1130 | Conserved hypothetical protein. | Protein serine/threonine phosphatase. | 0.840 |
ABB57160.1 | ABB56175.1 | Synpcc7942_1130 | Synpcc7942_0143 | Protein serine/threonine phosphatase. | Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.632 |
ABB57160.1 | ABB56632.1 | Synpcc7942_1130 | Synpcc7942_0600 | Protein serine/threonine phosphatase. | Serine/threonine protein kinase. | 0.848 |
ABB57160.1 | ABB56812.1 | Synpcc7942_1130 | Synpcc7942_0780 | Protein serine/threonine phosphatase. | Serine/threonine protein kinase. | 0.838 |
ABB57160.1 | ABB56992.1 | Synpcc7942_1130 | Synpcc7942_0962 | Protein serine/threonine phosphatase. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.872 |
ABB57160.1 | ABB57141.1 | Synpcc7942_1130 | Synpcc7942_1111 | Protein serine/threonine phosphatase. | Serine/threonine protein kinase. | 0.846 |
ABB57160.1 | ABB57151.1 | Synpcc7942_1130 | Synpcc7942_1121 | Protein serine/threonine phosphatase. | Serine/threonine protein kinase. | 0.845 |
ABB57160.1 | ABB57159.1 | Synpcc7942_1130 | Synpcc7942_1129 | Protein serine/threonine phosphatase. | Conserved hypothetical protein. | 0.840 |
ABB57160.1 | ABB57324.1 | Synpcc7942_1130 | Synpcc7942_1294 | Protein serine/threonine phosphatase. | Serine/threonine protein kinase. | 0.856 |
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