STRINGSTRING
ABB57170.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57170.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57170.1annotation not available (585 aa)    
Predicted Functional Partners:
ABB57171.1
annotation not available (228 aa)
              0.805
ABB57634.1
annotation not available (450 aa)
   
          0.730
ABB57512.1
annotation not available (521 aa)
   
          0.724
ABB56884.1
annotation not available (798 aa)
   
        0.566
ABB58284.1
annotation not available (452 aa)
   
          0.557
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family (525 aa)
   
        0.555
ABB57169.1
annotation not available (556 aa)
              0.553
psbO
Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII (277 aa)
   
        0.504
ABB57615.1
annotation not available (261 aa)
   
          0.492
ABB56104.1
annotation not available (217 aa)
   
        0.485
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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