STRINGSTRING
SEE0026 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEE0026" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE0026annotation not available (476 aa)    
Predicted Functional Partners:
ABB57232.1
annotation not available (822 aa)
   
        0.858
ABB57230.1
annotation not available (337 aa)
              0.827
ABB56079.1
annotation not available (788 aa)
 
 
  0.740
ABB57229.1
annotation not available (234 aa)
   
 
  0.716
ABB57234.1
Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module (104 aa)
 
          0.712
ABB56840.1
annotation not available (709 aa)
   
 
  0.704
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (953 aa)
   
 
  0.683
ABB57233.1
annotation not available (137 aa)
 
          0.678
crtB
All-trans-phytoene synthase; Involved in the biosynthesis of carotenoids. Catalyzes the condensation of two molecules of geranylgeranyl diphosphate (GGPP) to give prephytoene diphosphate (PPPP) and the subsequent rearrangement of the cyclopropylcarbinyl intermediate to yield all-trans phytoene (308 aa)
   
 
  0.664
ABB56082.1
annotation not available (848 aa)
   
 
  0.660
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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