STRINGSTRING
SEE0016 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEE0016" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE0016annotation not available (114 aa)    
Predicted Functional Partners:
SEE0015
annotation not available (86 aa)
 
          0.969
SEE0017
annotation not available (82 aa)
 
          0.921
SEE0018
annotation not available (86 aa)
 
          0.913
ABB56442.1
annotation not available (90 aa)
   
          0.659
ABB57238.1
Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module (84 aa)
              0.544
SEE0020
annotation not available (87 aa)
              0.544
ABB56839.1
annotation not available (279 aa)
   
          0.518
ABB56890.1
annotation not available (319 aa)
   
          0.495
ABB58417.1
annotation not available (671 aa)
   
          0.450
SEF0014
Ribonuclease VapC; Toxic component of a toxin-antitoxin (TA) module. An RNase (138 aa)
 
          0.447
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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