STRINGSTRING
SEF0013 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEF0013" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF0013annotation not available (167 aa)    
Predicted Functional Partners:
ABB57286.1
annotation not available (184 aa)
     
 
  0.969
ABB56820.1
annotation not available (264 aa)
     
 
  0.969
gshB
annotation not available (323 aa)
     
 
  0.947
srpE
annotation not available (508 aa)
     
 
  0.913
ABB56217.1
annotation not available (508 aa)
     
 
  0.913
ABB56873.1
annotation not available (446 aa)
   
 
  0.911
ABB58169.1
annotation not available (203 aa)
     
 
  0.909
ABB56803.1
annotation not available (404 aa)
     
 
  0.909
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (720 aa)
           
  0.808
SEF0012
annotation not available (335 aa)
   
        0.764
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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