node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplK | Synpcc7942_0633 | Synpcc7942_0634 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplT | Synpcc7942_0633 | Synpcc7942_1277 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
rplA | rplU | Synpcc7942_0633 | Synpcc7942_1219 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
rplA | rplV | Synpcc7942_0633 | Synpcc7942_2227 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.998 |
rplA | rpmA | Synpcc7942_0633 | Synpcc7942_1220 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
rplA | rpmB | Synpcc7942_0633 | Synpcc7942_0042 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.987 |
rplA | rpmF | Synpcc7942_0633 | Synpcc7942_0997 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. | 0.994 |
rplA | rpsD | Synpcc7942_0633 | Synpcc7942_1487 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.995 |
rplA | rpsI | Synpcc7942_0633 | Synpcc7942_2205 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
rplA | rpsP | Synpcc7942_0633 | Synpcc7942_1772 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.994 |
rplK | rplA | Synpcc7942_0634 | Synpcc7942_0633 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.999 |
rplK | rplT | Synpcc7942_0634 | Synpcc7942_1277 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
rplK | rplU | Synpcc7942_0634 | Synpcc7942_1219 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
rplK | rplV | Synpcc7942_0634 | Synpcc7942_2227 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.996 |
rplK | rpmA | Synpcc7942_0634 | Synpcc7942_1220 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.998 |
rplK | rpmB | Synpcc7942_0634 | Synpcc7942_0042 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.992 |
rplK | rpmF | Synpcc7942_0634 | Synpcc7942_0997 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. | 0.994 |
rplK | rpsD | Synpcc7942_0634 | Synpcc7942_1487 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.995 |
rplK | rpsI | Synpcc7942_0634 | Synpcc7942_2205 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
rplK | rpsP | Synpcc7942_0634 | Synpcc7942_1772 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.994 |