STRINGSTRING
ABB57304.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57304.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57304.1annotation not available (175 aa)    
Predicted Functional Partners:
ABB57306.1
annotation not available (260 aa)
     
      0.762
ABB57305.1
annotation not available (387 aa)
              0.753
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (116 aa)
   
        0.751
ABB57703.1
annotation not available (221 aa)
   
 
      0.735
ABB57280.1
Photosystem I reaction center subunit III; PSI-F; plastocyanin; cyt c553; docking protein (159 aa)
   
 
  0.716
ABB56894.1
annotation not available (172 aa)
   
      0.703
SED0024
annotation not available (285 aa)
   
          0.694
ABB56594.1
annotation not available (151 aa)
   
          0.692
ABB56197.1
annotation not available (166 aa)
   
          0.690
rpmI
annotation not available (66 aa)
              0.665
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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