STRINGSTRING
ABB57306.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57306.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57306.1annotation not available (260 aa)    
Predicted Functional Partners:
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (116 aa)
              0.880
ABB56281.1
annotation not available (261 aa)
 
  0.826
rpmI
annotation not available (66 aa)
              0.771
ABB57304.1
annotation not available (175 aa)
     
      0.762
ABB57305.1
annotation not available (387 aa)
              0.749
ABB56280.1
annotation not available (396 aa)
 
 
  0.745
ABB56108.1
annotation not available (253 aa)
   
          0.706
ABB57311.1
annotation not available (230 aa)
 
 
      0.696
ABB56279.1
annotation not available (377 aa)
 
     
  0.678
ABB57310.1
annotation not available (364 aa)
              0.634
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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