STRINGSTRING
ABB57354.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57354.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57354.1annotation not available (919 aa)    
Predicted Functional Partners:
ABB57861.1
annotation not available (387 aa)
   
      0.699
ABB56726.1
annotation not available (307 aa)
   
 
  0.671
ABB56710.1
annotation not available (211 aa)
     
 
  0.633
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (238 aa)
     
 
  0.553
ABB57941.1
annotation not available (745 aa)
     
 
  0.552
ABB57576.1
annotation not available (465 aa)
     
 
  0.552
ABB57154.1
annotation not available (670 aa)
     
 
  0.552
ABB57355.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (454 aa)
              0.528
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (279 aa)
     
      0.519
rpsA
30S ribosomal protein S1; Binds mRNA (295 aa)
     
 
  0.488
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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