STRINGSTRING
ABB57454.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57454.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57454.1annotation not available (161 aa)    
Predicted Functional Partners:
ccmM
Carbon dioxide concentrating mechanism protein CcmM; The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator (539 aa)
 
 
 
  0.956
ccmO
Uncharacterized protein CcmO; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (276 aa)
 
 
 
  0.823
ccmL
annotation not available (99 aa)
 
 
 
  0.811
ABB57565.1
annotation not available (152 aa)
   
     
  0.802
ABB57990.1
annotation not available (168 aa)
 
          0.779
ABB56864.1
annotation not available (356 aa)
   
          0.772
ABB56142.1
annotation not available (185 aa)
   
          0.772
ABB58429.1
annotation not available (392 aa)
   
        0.771
ABB56448.1
annotation not available (127 aa)
   
          0.771
ABB56897.1
annotation not available (111 aa)
   
          0.770
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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