STRINGSTRING
ABB57541.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57541.1" - annotation not available in Synechococcus elongatus PCC7942
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57541.1annotation not available (145 aa)    
Predicted Functional Partners:
zds
Probable zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (By similarity) (481 aa)
 
          0.829
ABB56594.1
annotation not available (151 aa)
   
          0.531
ABB57280.1
Photosystem I reaction center subunit III; PSI-F; plastocyanin; cyt c553; docking protein (159 aa)
   
        0.529
SED0024
annotation not available (285 aa)
   
        0.508
ABB56894.1
annotation not available (172 aa)
   
          0.504
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP); Belongs to the DXR family (402 aa)
              0.503
ABB57032.1
annotation not available (142 aa)
   
          0.493
ABB57544.1
annotation not available (199 aa)
              0.490
ABB58119.1
annotation not available (304 aa)
   
        0.489
ABB57703.1
annotation not available (221 aa)
   
 
      0.479
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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