STRINGSTRING
ABB57545.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57545.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57545.1annotation not available (299 aa)    
Predicted Functional Partners:
ABB57324.1
annotation not available (522 aa)
 
 
  0.858
ABB56632.1
annotation not available (510 aa)
 
  0.855
ABB57141.1
annotation not available (527 aa)
 
  0.854
ABB56812.1
annotation not available (457 aa)
 
 
  0.849
ABB57151.1
annotation not available (719 aa)
 
 
  0.833
ABB57544.1
annotation not available (199 aa)
              0.774
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP); Belongs to the DXR family (402 aa)
              0.708
ABB57961.1
annotation not available (256 aa)
     
 
  0.644
zds
Probable zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (By similarity) (481 aa)
              0.482
ABB57541.1
annotation not available (145 aa)
              0.419
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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