STRINGSTRING
ABB57576.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57576.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57576.1annotation not available (465 aa)    
Predicted Functional Partners:
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA; Belongs to the RNase Z family (393 aa)
     
  0.920
ABB57575.1
Ribonuclease VapC; Toxic component of a toxin-antitoxin (TA) module. An RNase (151 aa)
              0.845
ABB57574.1
annotation not available (83 aa)
              0.845
ABB57573.1
annotation not available (41 aa)
           
0.765
ABB57941.1
annotation not available (745 aa)
   
          0.629
ABB57354.1
annotation not available (919 aa)
     
 
  0.552
ABB57918.1
annotation not available (346 aa)
 
        0.529
ABB56710.1
annotation not available (211 aa)
     
 
  0.523
ABB58069.1
annotation not available (268 aa)
   
          0.522
ABB57006.1
annotation not available (909 aa)
   
 
  0.520
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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