STRINGSTRING
SED0024 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SED0024" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED0024annotation not available (285 aa)    
Predicted Functional Partners:
rpsA
30S ribosomal protein S1; Binds mRNA (295 aa)
 
        0.921
ABB56444.1
annotation not available (109 aa)
   
        0.887
ABB57619.1
annotation not available (429 aa)
              0.882
psbO
Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII (277 aa)
   
        0.835
ABB57280.1
Photosystem I reaction center subunit III; PSI-F; plastocyanin; cyt c553; docking protein (159 aa)
   
        0.830
ABB58047.1
annotation not available (97 aa)
   
        0.797
thf1
Protein Thf1; May be involved in photosynthetic membrane biogenesis (280 aa)
   
        0.795
ABB58119.1
annotation not available (304 aa)
   
        0.792
ABB58330.1
annotation not available (164 aa)
   
        0.790
psb28
annotation not available (112 aa)
   
        0.789
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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