STRINGSTRING
ABB57648.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57648.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57648.1annotation not available (168 aa)    
Predicted Functional Partners:
ABB57647.1
annotation not available (392 aa)
   
   
  0.894
ABB57650.1
annotation not available (501 aa)
   
        0.883
ABB57649.1
annotation not available (168 aa)
              0.882
ABB57646.1
annotation not available (128 aa)
   
        0.602
rpmH
annotation not available (45 aa)
         
  0.596
ABB57643.1
annotation not available (191 aa)
              0.537
ABB57803.1
annotation not available (105 aa)
     
 
  0.510
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (122 aa)
   
        0.503
ABB56908.1
annotation not available (808 aa)
       
      0.456
ABB56312.1
annotation not available (421 aa)
 
          0.445
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
Server load: low (19%) [HD]