STRINGSTRING
ABB57649.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57649.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57649.1annotation not available (168 aa)    
Predicted Functional Partners:
ABB57647.1
annotation not available (392 aa)
   
        0.888
ABB57650.1
annotation not available (501 aa)
              0.882
ABB57648.1
annotation not available (168 aa)
              0.882
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (105 aa)
     
      0.860
chpX
annotation not available (379 aa)
   
          0.783
ABB56546.1
annotation not available (140 aa)
   
          0.778
ABB57962.1
annotation not available (177 aa)
   
          0.774
chpY
annotation not available (430 aa)
   
          0.771
ABB58385.1
annotation not available (107 aa)
   
          0.770
ABB58017.1
annotation not available (104 aa)
   
          0.765
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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