STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57751.1PBS lyase HEAT-like repeat. (234 aa)    
Predicted Functional Partners:
cpcE
PBS lyase HEAT-like repeat; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family.
  
   
 0.785
cpcF
Phycocyanin alpha-subunit phycocyanobilin lyase; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family.
  
   
 0.693
ABB56357.1
Lc 7.8 apoprotein (core components of the phycobilisomes); Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
   
 0.669
ABB56360.1
Phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
  
   
 0.664
ABB56272.1
Hypothetical protein.
  
   
 0.656
ABB57867.1
Conserved hypothetical protein.
  
     0.618
cpcT-2
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.617
apcF
Allophycocyanin, beta subunit.
  
   
 0.609
ABB57019.1
Conserved hypothetical protein.
  
     0.598
efp
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity).
  
 0.588
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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