Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABB56570.1 | ABB57007.1 | Synpcc7942_0538 | Synpcc7942_0977 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphoribulokinase. | 0.560 |
| ABB56570.1 | ABB58110.1 | Synpcc7942_0538 | Synpcc7942_2080 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Fructose-6-phosphate phosphoketolase. | 0.917 |
| ABB56570.1 | cbbA | Synpcc7942_0538 | Synpcc7942_1443 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.974 |
| ABB56570.1 | gap2 | Synpcc7942_0538 | Synpcc7942_1742 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glyceraldehyde 3-phosphate dehydrogenase (NADP+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.971 |
| ABB56570.1 | pgi | Synpcc7942_0538 | Synpcc7942_2029 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glucose-6-phosphate isomerase. | 0.981 |
| ABB56570.1 | pgk | Synpcc7942_0538 | Synpcc7942_1116 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.886 |
| ABB56570.1 | tal | Synpcc7942_0538 | Synpcc7942_2297 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily. | 0.994 |
| ABB56570.1 | tpiA | Synpcc7942_0538 | Synpcc7942_1261 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.976 |
| ABB56570.1 | zwf | Synpcc7942_0538 | Synpcc7942_2334 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.723 |
| ABB57007.1 | ABB56570.1 | Synpcc7942_0977 | Synpcc7942_0538 | Phosphoribulokinase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.560 |
| ABB57007.1 | cp12 | Synpcc7942_0977 | Synpcc7942_0361 | Phosphoribulokinase. | Conserved hypothetical protein. | 0.985 |
| ABB57007.1 | gap2 | Synpcc7942_0977 | Synpcc7942_1742 | Phosphoribulokinase. | Glyceraldehyde 3-phosphate dehydrogenase (NADP+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.998 |
| ABB57007.1 | pgk | Synpcc7942_0977 | Synpcc7942_1116 | Phosphoribulokinase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.720 |
| ABB57007.1 | tpiA | Synpcc7942_0977 | Synpcc7942_1261 | Phosphoribulokinase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.671 |
| ABB58110.1 | ABB56570.1 | Synpcc7942_2080 | Synpcc7942_0538 | Fructose-6-phosphate phosphoketolase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.917 |
| ABB58110.1 | cbbA | Synpcc7942_2080 | Synpcc7942_1443 | Fructose-6-phosphate phosphoketolase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.912 |
| ABB58110.1 | gap2 | Synpcc7942_2080 | Synpcc7942_1742 | Fructose-6-phosphate phosphoketolase. | Glyceraldehyde 3-phosphate dehydrogenase (NADP+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.932 |
| ABB58110.1 | pgi | Synpcc7942_2080 | Synpcc7942_2029 | Fructose-6-phosphate phosphoketolase. | Glucose-6-phosphate isomerase. | 0.917 |
| ABB58110.1 | pgk | Synpcc7942_2080 | Synpcc7942_1116 | Fructose-6-phosphate phosphoketolase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.415 |
| ABB58110.1 | tal | Synpcc7942_2080 | Synpcc7942_2297 | Fructose-6-phosphate phosphoketolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily. | 0.962 |
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