STRINGSTRING
ABB57777.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57777.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57777.1annotation not available (394 aa)    
Predicted Functional Partners:
ABB57780.1
annotation not available (128 aa)
 
          0.863
ABB57779.1
annotation not available (130 aa)
              0.819
ABB57778.1
annotation not available (253 aa)
              0.761
ABB57781.1
annotation not available (67 aa)
 
          0.722
ABB57782.1
annotation not available (250 aa)
 
          0.629
ABB57389.1
annotation not available (401 aa)
     
      0.477
sigA2
RNA polymerase sigma factor SigA2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is a component of the biological clock pathway that affects the circadian expression of a subset of genes in this bacterium (320 aa)
              0.458
ABB56260.1
annotation not available (86 aa)
   
          0.420
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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