STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57815.1Conserved hypothetical protein. (136 aa)    
Predicted Functional Partners:
ABB57816.1
Conserved hypothetical protein YCF51.
       0.773
ABB57817.1
SUF system FeS assembly protein.
       0.773
ABB57406.1
Hypothetical protein.
  
     0.770
ABB56166.1
Hypothetical protein.
  
     0.733
ABB57108.1
Conserved hypothetical protein.
  
     0.731
ABB57466.1
Conserved hypothetical protein.
  
   
 0.704
ABB56330.1
Hypothetical protein.
  
     0.687
ABB58387.1
Conserved hypothetical protein.
  
     0.676
ABB57174.1
Conserved hypothetical protein.
  
     0.668
ABB58116.1
Conserved hypothetical protein.
  
     0.660
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.