STRINGSTRING
SEN0014 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEN0014" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN0014annotation not available (252 aa)    
Predicted Functional Partners:
SEN0013
annotation not available (152 aa)
              0.845
SEN0012
annotation not available (208 aa)
              0.700
nrtA
Nitrate transport protein NrtA; Essential component of the nitrate-transporting system. May be the substrate-binding protein (443 aa)
           
  0.670
ABB57862.1
annotation not available (149 aa)
              0.560
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family (561 aa)
           
  0.555
ccmM
Carbon dioxide concentrating mechanism protein CcmM; The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator (539 aa)
         
  0.488
argH
annotation not available (474 aa)
           
  0.479
ABB57861.1
annotation not available (387 aa)
     
 
  0.468
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the ATCase/OTCase family (305 aa)
         
  0.435
ABB57044.1
annotation not available (928 aa)
 
 
 
  0.421
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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