STRINGSTRING
SEN0005 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEN0005" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN0005annotation not available (422 aa)    
Predicted Functional Partners:
ABB57235.1
annotation not available (54 aa)
           
  0.679
ABB56168.1
annotation not available (435 aa)
           
  0.679
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily (455 aa)
              0.597
ORF310
annotation not available (310 aa)
   
          0.508
ABB57870.1
annotation not available (168 aa)
              0.489
ABB56088.1
annotation not available (375 aa)
           
  0.472
petM
Cytochrome b6-f complex subunit 7; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (37 aa)
           
  0.471
ABB58171.1
annotation not available (154 aa)
           
  0.471
ABB56749.1
annotation not available (174 aa)
           
  0.471
ABB57869.1
annotation not available (246 aa)
 
          0.454
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
Server load: low (15%) [HD]