STRINGSTRING
SEN0002 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEN0002" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN0002annotation not available (75 aa)    
Predicted Functional Partners:
ABB56865.1
annotation not available (217 aa)
   
          0.613
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1); Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily (174 aa)
              0.599
ABB57873.1
annotation not available (269 aa)
              0.599
ABB57713.1
Uncharacterized protein Synpcc7942_1683; May have a regulatory function (81 aa)
   
          0.596
ABB56515.1
annotation not available (147 aa)
   
          0.594
ABB58286.1
annotation not available (184 aa)
   
          0.580
ABB57169.1
annotation not available (556 aa)
   
          0.576
ABB57677.1
annotation not available (306 aa)
   
          0.553
ABB56947.1
annotation not available (88 aa)
   
          0.542
ABB56147.1
annotation not available (171 aa)
   
          0.539
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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