STRINGSTRING
ABB57913.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57913.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57913.1annotation not available (239 aa)    
Predicted Functional Partners:
ABB57914.1
annotation not available (173 aa)
              0.852
ABB57915.1
annotation not available (255 aa)
              0.845
ABB57052.1
annotation not available (262 aa)
   
          0.780
SED0024
annotation not available (285 aa)
   
          0.768
ABB58047.1
annotation not available (97 aa)
   
          0.767
psb28
annotation not available (112 aa)
 
          0.764
psb27
Photosystem II lipoprotein Psb27; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese-oxide cluster (133 aa)
   
          0.760
ABB58330.1
annotation not available (164 aa)
   
          0.759
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase (75 aa)
   
          0.759
ABB56894.1
annotation not available (172 aa)
 
          0.752
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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