STRINGSTRING
ABB57915.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57915.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57915.1annotation not available (255 aa)    
Predicted Functional Partners:
ABB57914.1
annotation not available (173 aa)
   
   
  0.850
ABB57913.1
annotation not available (239 aa)
              0.845
ABB57457.1
annotation not available (111 aa)
 
   
  0.711
cbbL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (472 aa)
 
     
  0.684
ABB57916.1
annotation not available (684 aa)
              0.639
ABB57917.1
annotation not available (430 aa)
   
        0.511
psbU
Photosystem II 12 kDa extrinsic protein; Stabilizes the structure of photosystem II oxygen- evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation (136 aa)
              0.482
ABB57918.1
annotation not available (346 aa)
   
        0.460
ABB57381.1
annotation not available (236 aa)
   
          0.449
cmpR
HTH-type transcriptional activator CmpR; Activates transcription of the cmpABCD operon under carbon dioxide-limited conditions (323 aa)
   
          0.420
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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